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Publications |
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Romoff, T. T.; Sampson, N. S.; van Eikeren, P., (1987)
"Regioselectivity and Kinetics of Hydride Transfer in Substituted
1-Benzyl-3-quinolinecarboxamide Redox Reactions," J. Org.
Chem. 52, 4454-4459.
Sampson, N. S.; Bartlett, P. A., (1988) "Synthesis of Phosphonic
Acid Derivatives by Oxidative Activation of Phosphinate Esters,"
J. Org. Chem. 53, 4500-4503.
Sampson, N. S.; Bartlett, P. A., (1991) "Peptidic Phosphonylating
Agents as Irreversible Inhibitors of Serine Proteases and
Models of the Tetrahedral Intermediates," Biochemistry
30, 2255-2263.
Bone, R.; Sampson, N. S.; Bartlett, P. A.; Agard, D. A.,
(1991) "Crystal Structures of a-Lytic
Protease Complexes with Irreversibly Bound Phosphonate Esters,"
Biochemistry 30, 2263-2272.
Sampson, N. S.; Bartlett, P. A., (1991) "Attempted de Novo
Design, Synthesis, and Evaluation of a Ligand for the Allosteric
Site of Phosphofructokinase," J. Org. Chem. 56,
7179-7183.
Sampson, N. S.; Knowles, J. R., (1992) "Segmental Movement:
Definition of the Structural Requirements for Loop Closure
in Catalysis by Triosephosphate Isomerase," Biochemistry,
31, 8482-8487.
Sampson, N. S.; Knowles, J. R., (1992) "Segmental Motion
in Catalysis: Investigation of a Critical Hydrogen Bond for
Loop Closure in the Reaction of Triosephosphate Isomerase,"
Biochemistry, 31, 8488-8494.
Kass, I. J.; Sampson, N. S., (1995) "The Isomerization
Catalyzed by Brevibacterium sterolicum Cholesterol
Oxidase Proceeds Stereospecifically with One Base," Biochem.
Biophys. Res. Commun., 206, 688-693.
Sampson, N. S.; Kass, I. J., (1997) "Isomerization but not
Oxidation is Suppressed by a Single Point Mutation, E361Q,
in the Reaction Catalyzed by Cholesterol Oxidase," J.
Am. Chem. Soc., 119, 855-862.
Ghoshroy, K. B.; Zhu, W.; Sampson, N. S., (1997) "Investigation
of Membrane Disruption in the Reaction Catalyzed by Cholesterol
Oxidase," Biochemistry, 36, 6133-6140.
Pyluck, A.; Ruiyong, Y.; Galligan Jr, E.; Primakoff, P.;
Myles, D. G.; Sampson, N. S., (1997) "ECD Peptides Inhibit
In Vitro Fertilization in Mice," Bioorg. Med. Chem. Lett.,
7, 1053-1058.
Sampson, N. S.; McCann, A. E., (1997) "4,5-Cyclopropano-Cholestan-3b-Ol
Substrates for Cholesterol Oxidase and Their 1H NMR Assignments,
" J. Org. Chem., 62, 5893 -5897.
Sampson, N. S.; Chen, X., (1998) "Improved Expression of
Brevibacterium sterolicum Cholesterol Oxidase in
Escherichia coli by Genetic Modification," Prot. Exp.
Purific., 12, 347-352
.
Sampson, N. S.; Kass, I. J.; Ghoshroy, K. B., (1998) "A
Truncated W Loop Mutant of Cholesterol Oxidase Has Altered
Substrate Specificity," Biochemistry, 37,
5770-5778.
á Sun, J.; Sampson, N. S., (1998) "Determination of the
Amino Acid Requirements for a Protein Hinge in Triosephosphate
Isomerase," Prot. Science, 7, 1495-1505.
Kass, I. J.; Sampson, N. S., (1998) "The Importance of
Glu361 Position in the Reaction Catalyzed by Cholesterol Oxidase,"
Bioorg. Med. Chem. Lett., 8, 2663-2668.
Chen, H.; Pyluck, A.; Janik, M.; Sampson, N. S., (1998)
"Peptides Corresponding to the Epidermal Growth Factor-like
Domain of Mouse Fertilin: Synthesis and Biological Activity,"
Biopolymers (Peptide Science), 47,
299-307.
Kass, I. J.; Sampson, N. S., (1998) "Evaluation of the
Role of His447 in the Reaction Catalyzed by Cholesterol Oxidase,"Biochemistry,
37, 17990-18000.
Chen, H.; Sampson, N.S., (1999) "Mediation of Mammalian
Sperm-Egg Fusion: Evidence That Mouse Egg a6b1
Integrin is the Receptor for Sperm Fertilinb," Chem. Biol.,
6, 1-10.
Yue, Q. K.; Kass, I. J.; Sampson, N. S.; Vrielink, A.,
(1999) "Crystal Structure Determination of Cholesterol Oxidase
from Streptomyces and Structural Characterization
of Key Active Site Mutants," Biochemistry, 38,
4277-4286.
Sun, J.; Sampson, N. S., (1999) "Understanding Protein
Lids: Kinetic Analysis of Active Hinge Mutants in Triosephosphate
Isomerase," Biochemistry, 38, 11474-11481.
Gupta, S.; Li, H.; Sampson, N. S., (2000) "Characterization
of Fertilinb-Disintegrin Binding
Specificity in Sperm-Egg Adhesion," Bioorg. Med. Chem.,
8, 723-729.
McCann, A.; Sampson, N. S., (2000) "A C6-FAD Adduct is Formed
Upon Irreversible Inactivation of Cholesterol Oxidase by 2a,3a-Cyclopropano-5a-cholestan-3b-ol,"
J. Am.Chem. Soc., 122, 35-39.
Chen, X.; Wolfgang, D.; Sampson, N. S., (2000) "Use of the
Parallax-Quench Method to Determine the Position of the Active-Site
Loop of Cholesterol Oxidase in Lipid Bilayers," Biochemistry,
39, 13383-13389.
Sampson, N. S. (2001) "Dissection of a Flavo-Enzyme Active
Site: the Reaction Catalyzed by Cholesterol Oxidase," Antioxidants
and Redox Signalling, 3, 839-846.
Xiang, J; Sun, J.; Sampson, N. S. (2001) "The Importance
of Hinge Sequence for Loop Function and Catalytic Activity
in the Reaction Catalyzed by Triosephosphate Isomerase," J.
Mol. Biol, 307, 1103-1112.
Sampson, N. S.; Sarah T. Ryan; Deborah A. Enke; Dominic
Cosgrove; Victor Koteliansky; Philip Gotwals (2001) "Global
Gene Expression Analysis Reveals a Role for the a1Integrin
in Renal Pathogenesis," J. Biol. Chem, 276
34182-34188.
Sampson, N.S.; Mrksich, M.; Bertozzi, C.R. (2001) "Surface
Molecular Recognition," Proc. Nat. Acad. Sci. U.S.A.
98, 12870-12871.
Ye, Y.; Lario, P. Vrielink, A.; Sampson, N. S. (2001) "Structural
and Kinetic Analysis of the Role of Asn485 in the Reaction
Catalyzed by Cholesterol Oxidase," Biochemistry,
40, 13779-13787.
Sampson, N. S. (2001) "The Emerging Global Paradigm for
Scientific Research," in New Voices in Chemistry, Chem.
Eng. News, 26 Mar 2001, p. 187.
Gupta, S.; Sampson, N. S. (2001) "Dimyristoylated Peptides
Incorporated into Lipsomes Are Polyvalent Fertilinb
Mimics," Org. Lett. 3, 3333-333.
Li, H.; Sampson, N. S. (2002) "Structural Analysis of Cyclic
Peptide Fertilinb Mimics That Are
Ligands for a6b1
Integrin," J. Pep. Res. 59, 49-54
Ye, Y.; Liu, Pingsheng; Anderson, R.; Sampson, N. S. (2002)
"Construction of a Catalytically Inactive Cholesterol
Oxidase Mutant: Investigation of the Interplay Between Active
Site Residues Glutamate 361 and Histidine 447," Arch.
Biochem Biophys. 402, 235-242.
Roberts, S.K.; Sampson, N. S. (2003) “Increased Polymer
Length of Oligopeptide-substituted Polynorbornenes using LiCl,”
J. Org. Chem. 68, 2020-2023.
Lario, P.; Sampson, N.S.; Vrielink, A. (2003) “Sub-atomic
resolution crystal structure of cholesterol oxidase: What
atomic resolution crystallography reveals about enzyme mechanism
and the role of the FAD cofactor in redox activity,”
J. Mol. Biol. 326 1635-1650.
Roberts, S. K.; Konkar, S.; Sampson, N. S. (2003) “Comparison
of Fertilinb Peptide-Substituted
Polymers and Liposomes as Inhibitors of In Vitro
Fertilization,” ChemBioChem 4,
1229-1231 .
Sampson, N. S.; Vrielink, A. (2003) “Cholesterol Oxidases:
A Study of Nature’s Approach to Protein Design,”
Acc. Chem. Res 36, 713-722.
Kempf, J. G.; Jung, J-y.; Sampson, N. S.; Loria, J. P. (2003)
Off-Resonance TROSY (R1p-R1) for Quantitation of Fast Exchange
Processes in Large Proteins,” J. Am. Chem. Soc.
125, 12064-12065.
Vrielink, A.; Sampson, N. S.; (2003) “Sub-Ångstrom
Resolution Protein Structures: Is Seeing Believing?,”
Curr. Opin. Struct. Biol. 13, 709-713.
Ahn, K-w.; Sampson, N. S. (2004) “Cholesterol Oxidase
Senses Subtle Changes in Lipid Structure,” Biochemistry
43, 827-836.
Konkar, S.; Gupta, S.; Sampson, N. S. (2004) “Fertilinb
Liposomes Inhibit In Vitro Fertilization by Steric Stabilization,”
Bioorg. Med. Chem. Lett. 4, 1381-1384.
Xiang, J.; Sampson, N. S. (2004) "Library Screening
Studies to Investigate Substrate Specificity in the Reaction
Catalyzed by Cholesterol Oxidase," Prot. Engineering,
Design Selection, 17, 341-348.
Kursula, I.; Salin, M.; Sun, J.; Borledge, B.; Haapalainen,
A.; Sampson, N. S.; Wierenga, R. K. (2004) "Understanding
Protein Lids: Structural Analysis of Active Hinge Mutants
in Triosephosphate Isomerase," Prot. Engineering,
Design Selection, 17, 375-382.
Xiang, J.; Jung, J-y.; Sampson, N. S. (2004) “Entropy
Effects on Protein Hinges: the Reaction Catalyzed by Triosephosphate
Isomerase,” Biochemistry, 43,
11436-11445.
Roberts, S. K.; Sampson, N. S. (2004) "A Facile Synthetic
Route Leading to Fluorescently Labeled ROMP Polymers,”
Org. Lett., 6, 3253-3255.
Baessler, K.; Lee, Y.; Sampson, N.S.
(2005) “ROMP of norbonyl oligopeptides: A versatile
synthetic method for exploring receptor topology, “in
Understanding Biology Using Peptides, S. Blondelle, ed. American
Peptide Society,59-60.
Lee, Y.; Sampson, N. S.; (2006)
“ROMPing the Cellular Landscape: Linear Scaffolds for
Molecular Recognition,” Curr. Opin. Struct. Biol. 16,
544-550.
Baessler, K.; Lee, Y.; Roberts,
K. S.; Facompre, N.; Sampson, N. S. (2006) “Multivalent
fertilin? oligopeptides: the dependence of fertilization inhibition
on length and density,” Chem. Biol. 13, 251-259.
Lee, J; Parker, K. L.*; Sampson,
N. S.* (2006) “Amino Acid-Bearing ROMP polymers with
a Stereoregular Backbone,” J. Am. Chem. Soc. 128,
4578-4579.
Lee, Y.; Sampson,
N. S. (2006) “ROMPing the Cellular Landscape: Linear
Scaffolds for Molecular Recognition,” Curr. Opin.
Struct. Biol. 16, 544-550.
Lee, Y.; Baessler, K.; Sampson, N. S. (2006) “ROMP
of norbornyl oligopeptides: A versatile synthetic
method for exploring receptor topology,” in Understanding
Biology Using Peptides, S. Blondelle, ed., American
Peptide Society (2005), 59-60.
Kempf, J. G.; Jung, J-y.; Ragain, C.; Sampson, N. S.; Loria,
J. P. (2007) “Dynamic requirements for a functional
protein hinge,” J. Mol. Biol. 368,
131-149.
Nesbitt, N. M.; Sampson, N.S. (2007) “Antifungal
Tradecraft by Cholesterol Oxidase,” Chem. Biol. 14, 238-241.
Yang, X; Dubnau, E. Smith, I; Sampson, N. S. (2007) “Rv1106c from Mycobacterium
tuberculosis is a 3b-hydroxysteroid dehydrogenase,” Biochemistry,46,
9058-9067.
Lyubimov, A. Y.; Heard, K. Tang, H.; Sampson, N. S; Vrielink,
A. (2007) “Distortion of flavin geometry linked to
ligand binding in cholesterol oxidase,” Protein
Science, 16, 2647-2656.
Sampson, N. S. and Kwak, S. (2008) “ Catalysis
at the membrane Interface: Cholesterol oxidase
as a case study“, in Proceedings of the 3rd International
Beilstein Workshop on Experimental Standard Conditions
of Enzyme Characterizations. Beilstein, Germany.
Chen, L.; Lyubimov, A. Y.; Vrielink, A.; Sampson, N.
S. (2008) “A hydrophobic tunnel that determines oxygen
binding affinity in the reaction catalyzed by cholesterol
oxidase,” Biochemistry, 47,
5368–5377.
Elalami, A; Baessler, K.; Kong, F.; Sampson, N. S.; Kreit,
J. (2008) “Subcellular forms of cholesterol oxidase
from Rhodococcus sp. CIP 105 335: induction,
solubilization and characterization,” in Current
Research Topics in Applied Microbiology and Microbial Biotechnology,
World Scientific Publishing.
Dufour, A.; Sampson, N. S.; Zucker, S.; Cao, J. (2008) “Role
of the hemopexin domain of matrix metalloproteinase-9 in
cell migration,” J. Cell Physiol., 217,
643-651.
Lee, Y.; Sampson, N. S. (2009) “Polymeric ADAM
protein mimics interrogate mammalian sperm-egg binding,” ChemBioChem,
10, 929-937.
Song, A..; Parker, K.*; Sampson, N. S.* (2009) “Synthesis
of copolymers by alternating romp (AROMP),” J.
Am. Chem. Soc.,
131, 3444–3445.
Baessler, K.; Lee, Y.; Sampson, N. S. (2009) “b1 Integrin
is an adhesion protein for sperm binding to eggs,” ACS
Chem. Biology, 4, 357-366. [link
for non-subscribers][link
for subscribers][podcast][point
of view]
Yang, X.; Nesbitt, N. M.; Dubnau, E.; Smith, I.; Sampson,
N. S. (2009), “Cholesterol metabolism increases the metabolic
pool of propionate in M. tuberculosis,” Biochemistry, 48,
3819-3821. [link
for non-subscribers][link
for subscribers]
Kreit, J; Sampson, N. S. (2009) “Cholesterol oxidase:
Physiological functions,” FEBS,276,
6844-6856.[link]
Lyubimov, A. Y.; Chen, L.; Sampson, N. S.; Vrielink, A.
(2009) “A hydrogen-bonding network is important for oxidation
and isomerization in the reaction catalyzed by cholesterol
oxidase,” Acta Crys. D, 65, 1222-1231.
[link]
Nesbitt, N. M.; Fontán, P.; Kolesnikova, I.; Smith, I.;
Sampson, N. S.*; Dubnau, E.* (2010) “A thiolase of M. tuberculosis
is required for virulence and for production of androstenedione
and androstadienedione from cholesterol,” Infect. Immun., 78. 275-282. [PMC2798224]
Song, A.; Lee, J.; Parker, K. A.; Sampson, N. S. (2010) “Scope of the ring opening metathesis polymerization (ROMP) reaction of 1-substituted cyclobutenes,” J. Am. Chem. Soc., 132, 10513–10520. DOI: 10.1021/ja1037098 [link for non-subscribers][link
for subscribers]
Song, A.; Parker, K. A.; Sampson, N. S. (2010) “Cyclic
alternating ROMP (CAROMP). Rapid access to functionalized
cyclic polymers,” Org. Lett. 12, 3729-3731. DOI: 10.1021/ol101432m
[link
for non-subscriber][link
for subscribers]
Dufour, A., Sampson, N. S., Kuscu,
C., Zucker, S. and Cao, J. (2010) “Roles of MMP-9
homodimer and heterodimer in cell migration,”J.
Biol. Chem., 285, 35944-56. .10.1074/jbc.M109.091769
[link]
Yang, X.; Gao, J.; Smith, I.; Dubnau, E.; Sampson, N. S. (2011), “Cholesterol Is not an essential source of nutrition for Mycobacterium tuberculosis during infection,””J. Bact., 193, 1473-147. DOI:10.1128/JB.01210-10
[link]
Song, A.; Walker, S. G.; Parker, K. A.; Sampson, N. S. (2011) “Antibacterial studies of alternating, random and homo-polymers with varied positions of cationic side chains,” ACS Chem. Biol., 6, 590-599. DOI: 10.1021/cb100413w
[link]
Thomas, S.; Yang, X.; Sampson, N. S. (2011), “Inhibition of the M. tuberculosis 3Beta-Hydroxysteroid Dehydrogenase by Azasteroids,” Bioorg. Med. Chem. Lett., 21, 2216-2219.DOI:10.1016/j.bmcl.2011.03.004
[link]
Dufour, A.; Sampson, N. S.; Rizzo, R; DeLeon, J; Li, J; Kuscu, C.; Zhi, J.; Jaber, N.; Liu, E.; Zucker, S.; Cao, J. (2011) “Small molecule anti-cancer therapy selectively targets the hemopexin domain of matrix metalloproteinase-9 (MMP-9),” Cancer Res., 71, 4977-4988. 10.1158/0008-5472 PMC3138841
[link]
Zarrabi, K.; Dufour, A.; Li, J; Kuscu, C.; Kozarekar, P.; Zhi, J.; Sampson, N. S.; Zucker, S.; Cao, J. (2011) “Inhibition of matrix metalloproteinase-14 (MMP-14)-mediated cancer cell migration,” J. Biol. Chem., in press, DOI:10.1074/jbc.M111.256644
[link]
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